Index A | B | C | D | E | F | G | H | I | L | M | N | O | P | R | S | T | U | V | X | Z A adata (multimil.model.MILClassifier attribute) adata_manager (multimil.model.MILClassifier attribute) add_module() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) Aggregator (class in multimil.nn) apply() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) B bfloat16() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) buffers() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) C call_super_init (multimil.module.MILClassifierTorch attribute) (multimil.nn.Aggregator attribute) (multimil.nn.MLP attribute) children() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) compile() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) convert_legacy_save() (multimil.model.MILClassifier class method) cpu() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) cuda() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) D data_registry() (multimil.model.MILClassifier method) deregister_manager() (multimil.model.MILClassifier method) device (multimil.model.MILClassifier attribute) (multimil.module.MILClassifierTorch attribute) differential_abundance() (multimil.model.MILClassifier method) double() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) dump_patches (multimil.module.MILClassifierTorch attribute) (multimil.nn.Aggregator attribute) (multimil.nn.MLP attribute) E eval() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) extra_repr() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) F float() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) forward() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) G generative() (multimil.module.MILClassifierTorch method) get_anndata_manager() (multimil.model.MILClassifier method) get_buffer() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) get_extra_state() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) get_from_registry() (multimil.model.MILClassifier method) get_model_output() (multimil.model.MILClassifier method) get_normalized_expression() (multimil.model.MILClassifier method) get_normalized_function_name (multimil.model.MILClassifier attribute) get_parameter() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) get_sample_representations() (in module multimil.utils) get_setup_arg() (multimil.model.MILClassifier method) get_state_registry() (multimil.model.MILClassifier method) get_submodule() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) get_var_names() (multimil.model.MILClassifier method) H half() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) history (multimil.model.MILClassifier attribute) I inference() (multimil.module.MILClassifierTorch method) ipu() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) is_trained (multimil.model.MILClassifier attribute) L load() (multimil.model.MILClassifier class method) load_query_data() (multimil.model.MILClassifier class method) load_registry() (multimil.model.MILClassifier static method) load_state_dict() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) loss() (multimil.module.MILClassifierTorch method) M MILClassifier (class in multimil.model) MILClassifierTorch (class in multimil.module) MLP (class in multimil.nn) module multimil.model multimil.module multimil.nn multimil.utils modules() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) mtia() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) multimil.model module multimil.module module multimil.nn module multimil.utils module N named_buffers() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) named_children() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) named_modules() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) named_parameters() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) O on_load() (multimil.module.MILClassifierTorch method) P parameters() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) plot_losses() (multimil.model.MILClassifier method) plt_plot_losses() (in module multimil.utils) prepare_query_anndata() (multimil.model.MILClassifier static method) prepare_query_mudata() (multimil.model.MILClassifier static method) R register_backward_hook() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_buffer() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_forward_hook() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_forward_pre_hook() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_full_backward_hook() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_full_backward_pre_hook() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_load_state_dict_post_hook() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_load_state_dict_pre_hook() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_manager() (multimil.model.MILClassifier class method) register_module() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_parameter() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_state_dict_post_hook() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) register_state_dict_pre_hook() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) registry (multimil.model.MILClassifier attribute) requires_grad_() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) run_id (multimil.model.MILClassifier attribute) run_name (multimil.model.MILClassifier attribute) S sample() (multimil.module.MILClassifierTorch method) save() (multimil.model.MILClassifier method) score_top_cells() (in module multimil.utils) select_losses_to_plot() (multimil.module.MILClassifierTorch method) set_extra_state() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) set_submodule() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) setup_anndata() (multimil.model.MILClassifier class method) setup_ordinal_regression() (in module multimil.utils) share_memory() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) state_dict() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) summary_string (multimil.model.MILClassifier attribute) T T_destination (multimil.module.MILClassifierTorch attribute) (multimil.nn.Aggregator attribute) (multimil.nn.MLP attribute) test_indices (multimil.model.MILClassifier attribute) to() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) to_device() (multimil.model.MILClassifier method) to_empty() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) train() (multimil.model.MILClassifier method) (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) train_indices (multimil.model.MILClassifier attribute) training (multimil.module.MILClassifierTorch attribute) (multimil.nn.Aggregator attribute) (multimil.nn.MLP attribute) transfer_fields() (multimil.model.MILClassifier method) type() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) U update_setup_method_args() (multimil.model.MILClassifier method) V validation_indices (multimil.model.MILClassifier attribute) view_anndata_setup() (multimil.model.MILClassifier method) view_registry() (multimil.model.MILClassifier method) view_setup_args() (multimil.model.MILClassifier static method) view_setup_method_args() (multimil.model.MILClassifier method) X xpu() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method) Z zero_grad() (multimil.module.MILClassifierTorch method) (multimil.nn.Aggregator method) (multimil.nn.MLP method)